nhs_number

Sus OP Measurement

  • Value copied from NHSNumber

  • NHSNumber Patient NHS Number NHS NUMBER

select
    distinct
        d.DiagnosisICD,
        op.GeneratedRecordIdentifier,
        op.NHSNumber,
        op.CDSActivityDate
from omop_staging.sus_OP_ICDDiagnosis d
    inner join omop_staging.sus_OP op
        on d.MessageId = op.MessageId
where op.NHSNumber is not null
	and AttendedorDidNotAttend in ('5','6')

Comment or raise an issue for this mapping.

Sus CCMDS Measurement - Gestation Length at Delivery

  • Value copied from NHSNumber

  • NHSNumber Patient NHS Number NHS NUMBER

		select distinct
				apc.NHSNumber,
				apc.GeneratedRecordIdentifier,
				cc.CriticalCareStartDate as MeasurementDate,
				coalesce(cc.CriticalCareStartTime, '00:00:00') as MeasurementDateTime,
				cc.GestationLengthAtDelivery as ValueAsNumber
		from omop_staging.sus_CCMDS cc 
		inner join omop_staging.sus_APC apc on cc.GeneratedRecordID = apc.GeneratedRecordIdentifier
		where apc.NHSNumber is not null
		and cc.GestationLengthAtDelivery is not null

Comment or raise an issue for this mapping.

Sus CCMDS Measurement - Person Weight

  • Value copied from NHSNumber

  • NHSNumber Patient NHS Number NHS NUMBER

		select distinct
				apc.NHSNumber,
				apc.GeneratedRecordIdentifier,
				cc.CriticalCareStartDate as MeasurementDate,
				coalesce(cc.CriticalCareStartTime, '00:00:00') as MeasurementDateTime,
				cc.PersonWeight as ValueAsNumber
		from omop_staging.sus_CCMDS cc 
		inner join omop_staging.sus_APC apc on cc.GeneratedRecordID = apc.GeneratedRecordIdentifier
		where apc.NHSNumber is not null
		and cc.PersonWeight is not null

Comment or raise an issue for this mapping.

Sus APC Measurement

  • Value copied from NHSNumber

  • NHSNumber Patient NHS Number NHS NUMBER

select
    distinct
        d.DiagnosisICD,
        apc.GeneratedRecordIdentifier,
        apc.NHSNumber,
        apc.CDSActivityDate
from omop_staging.sus_ICDDiagnosis d
    inner join omop_staging.sus_APC apc
        on d.MessageId = apc.MessageId
where apc.NHSNumber is not null
order by
	d.DiagnosisICD,
    apc.GeneratedRecordIdentifier,
    apc.NHSNumber,
    apc.CDSActivityDate

Comment or raise an issue for this mapping.

SACT Measurement Weight at Start of Regimen

  • Value copied from NHS_Number

  • NHS_Number Patient NHS Number NHS NUMBER

		select distinct 
			NHS_Number,
			Weight_At_Start_Of_Regimen,
			Start_Date_Of_Regimen
		from omop_staging.sact_staging

Comment or raise an issue for this mapping.

SACT Measurement Weight at Start of Cycle

  • Value copied from NHS_Number

  • NHS_Number Patient NHS Number NHS NUMBER

		select distinct 
			NHS_Number,
			Weight_At_Start_Of_Cycle,
			Start_Date_Of_Cycle
		from omop_staging.sact_staging

Comment or raise an issue for this mapping.

SACT Measurement Height

  • Value copied from NHS_Number

  • NHS_Number Patient NHS Number NHS NUMBER

		select distinct 
			NHS_Number,
			Height_At_Start_Of_Regimen,
			Start_Date_Of_Regimen
		from omop_staging.sact_staging

Comment or raise an issue for this mapping.

Oxford Lab Measurement

  • Value copied from NHS_NUMBER

  • NHS_NUMBER Patient NHS Number NHS NUMBER

select
	NHS_NUMBER,
	EVENT,
	EVENT_START_DT_TM,
	RESULT_VALUE,
	RESULT_UNITS,
	NORMAL_LOW,
	NORMAL_HIGH
from ##duckdb_source##
where lower(EVENT) not like '%comment%'

Comment or raise an issue for this mapping.

COSD V9 Lung Measurement N Category Integrated Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

select 
  distinct
    Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
    coalesce(
        Record ->> '$.PrimaryPathway.Staging.StageDateFinalPretreatmentStage',
        Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed'
    ) as MeasurementDate,
    Record ->> '$.PrimaryPathway.Staging.NCategoryIntegratedStage' as NCategoryIntegratedStage
from omop_staging.cosd_staging_901
where type = 'LU'
  and NCategoryIntegratedStage is not null
  and NhsNumber is not null

Comment or raise an issue for this mapping.

COSD V9 Lung Measurement N Category Final Pre Treatment Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

select
  distinct
    Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
    coalesce(
        Record ->> '$.PrimaryPathway.Staging.StageDateFinalPretreatmentStage',
        Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed'
    ) as MeasurementDate,
    Record ->> '$.PrimaryPathway.Staging.NCategoryFinalPretreatment' as NcategoryFinalPreTreatment
from omop_staging.cosd_staging_901
where type = 'LU'
  and NcategoryFinalPreTreatment is not null
  and NhsNumber is not null

Comment or raise an issue for this mapping.

COSD V9 Lung Measurement M Category Integrated Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

select 
  distinct
    Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
    coalesce(
        Record ->> '$.PrimaryPathway.Staging.StageDateFinalPretreatmentStage',
        Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed'
    ) as MeasurementDate,
    Record ->> '$.PrimaryPathway.Staging.MCategoryIntegratedStage' as MCategoryIntegratedStage
from omop_staging.cosd_staging_901
where type = 'LU'
  and MCategoryIntegratedStage is not null
  and NhsNumber is not null

Comment or raise an issue for this mapping.

COSD V9 Lung Measurement M Category Final Pre Treatment Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

select 
  distinct
    Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
    coalesce(
        Record ->> '$.PrimaryPathway.Staging.StageDateFinalPretreatmentStage',
        Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed'
    ) as MeasurementDate,
    Record ->> '$.PrimaryPathway.Staging.MCategoryFinalPretreatment' as McategoryFinalPreTreatment
from omop_staging.cosd_staging_901
where type = 'LU'
  and McategoryFinalPreTreatment is not null
  and NhsNumber is not null

Comment or raise an issue for this mapping.

COSD V9 Lung Measurement Grade of Differentiation (At Diagnosis)

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

select
    distinct
        Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
        Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed' as DateOfPrimaryDiagnosisClinicallyAgreed,
        Record ->> '$.PrimaryPathway.Diagnosis.GradeOfDifferentiationAtDiagnosis.@code' as GradeOfDifferentiationAtDiagnosis
from omop_staging.cosd_staging_901
where Type = 'LU'
  and GradeOfDifferentiationAtDiagnosis is not null
  and NhsNumber is not null

Comment or raise an issue for this mapping.

COSD V8 Lung Measurement Tumour Laterality

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with lung as (
    select
        Record ->> '$.Lung.LungCore.LungCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
        Record ->> '$.Lung.LungCore.LungCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
        Record ->> '$.Lung.LungCore.LungCoreLinkageDiagnosticDetails.DateOfNonPrimaryCancerDiagnosisClinicallyAgreed' as DateOfNonPrimaryCancerDiagnosisClinicallyAgreed,
        Record ->> '$.Lung.LungCore.LungCoreLinkageDiagnosticDetails.TumourLaterality.@code' as TumourLaterality
    from omop_staging.cosd_staging_81
    where Type = 'LU'
)
select distinct
    NhsNumber,
    coalesce(ClinicalDateCancerDiagnosis, DateOfNonPrimaryCancerDiagnosisClinicallyAgreed) as MeasurementDate,
    TumourLaterality
from lung
where TumourLaterality is not null
  and TumourLaterality in ('L','R','M','B')
  and NhsNumber is not null;

Comment or raise an issue for this mapping.

COSD V8 Lung Measurement TNM Category Integrated Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with lung as (
    select
        Record ->> '$.Lung.LungCore.LungCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
        Record ->> '$.Lung.LungCore.LungCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
        Record ->> '$.Lung.LungCore.LungCoreStaging.IntegratedStageTNMStageGrouping' as TnmStageGroupingIntegrated,
        Record ->> '$.Lung.LungCore.LungCoreStaging.IntegratedStageTNMStageGroupingDate' as StageDateIntegratedStage
    from omop_staging.cosd_staging_81
    where Type = 'LU'
)
select distinct
    NhsNumber,
    coalesce(StageDateIntegratedStage, ClinicalDateCancerDiagnosis) as MeasurementDate,
    TnmStageGroupingIntegrated
from lung
where TnmStageGroupingIntegrated is not null
and NhsNumber is not null;

Comment or raise an issue for this mapping.

COSD V8 Lung Measurement TNM Category Final Pre Treatment Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with lung as (
    select
        Record ->> '$.Lung.LungCore.LungCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
        Record ->> '$.Lung.LungCore.LungCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
        Record ->> '$.Lung.LungCore.LungCoreStaging.FinalPreTreatmentTNMStageGrouping' as TnmStageGroupingFinalPretreatment,
        Record ->> '$.Lung.LungCore.LungCoreStaging.FinalPreTreatmentTNMStageGroupingDate' as StageDateFinalPretreatmentStage
    from omop_staging.cosd_staging_81
    where Type = 'LU'
)
select distinct
    NhsNumber,
    coalesce(StageDateFinalPretreatmentStage, ClinicalDateCancerDiagnosis) as MeasurementDate,
    TnmStageGroupingFinalPretreatment
from lung
where TnmStageGroupingFinalPretreatment is not null
and NhsNumber is not null;

Comment or raise an issue for this mapping.

COSD V8 Lung Measurement T Category Integrated Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with lung as (
    select
        Record ->> '$.Lung.LungCore.LungCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
        Record ->> '$.Lung.LungCore.LungCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
        Record ->> '$.Lung.LungCore.LungCoreStaging.IntegratedStageTCategory' as TCategoryIntegratedStage,
        Record ->> '$.Lung.LungCore.LungCoreStaging.IntegratedStageTNMStageGroupingDate' as StageDateIntegratedStage
    from omop_staging.cosd_staging_81
    where Type = 'LU'
)
select distinct
    NhsNumber,
    coalesce(StageDateIntegratedStage, ClinicalDateCancerDiagnosis) as MeasurementDate,
    TCategoryIntegratedStage
from lung
where TCategoryIntegratedStage is not null
and NhsNumber is not null;

Comment or raise an issue for this mapping.

COSD V8 Lung Measurement T Category Final Pre Treatment Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with lung as (
    select
        Record ->> '$.Lung.LungCore.LungCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
        Record ->> '$.Lung.LungCore.LungCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
        Record ->> '$.Lung.LungCore.LungCoreStaging.FinalPreTreatmentTCategory' as TcategoryFinalPreTreatment,
        Record ->> '$.Lung.LungCore.LungCoreStaging.FinalPreTreatmentTNMStageGroupingDate' as StageDateFinalPretreatmentStage
    from omop_staging.cosd_staging_81
    where Type = 'LU'
)
select distinct
    NhsNumber,
    coalesce(StageDateFinalPretreatmentStage, ClinicalDateCancerDiagnosis) as MeasurementDate,
    TcategoryFinalPreTreatment
from lung
where TcategoryFinalPreTreatment is not null
and NhsNumber is not null;

Comment or raise an issue for this mapping.

COSD V8 Lung Measurement Primary Pathway Metastasis

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with lung as (
select 
    Record ->> '$.Lung.LungCore.LungCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
    Record ->> '$.Lung.LungCore.LungCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
    unnest(
      [
        [
          Record ->> '$.Lung.LungCore.LungCoreDiagnosis.MetastaticSite.@code'
        ], 
        Record ->> '$.Lung.LungCore.LungCoreDiagnosis.MetastaticSite[*].@code'
      ], recursive := true
    ) as MetastaticSite
from omop_staging.cosd_staging_81
where Type = 'LU'
)
select distinct
    NhsNumber,
    ClinicalDateCancerDiagnosis,
    MetastaticSite
from lung
where MetastaticSite is not null
  and MetastaticSite != 97
  and NhsNumber is not null;

Comment or raise an issue for this mapping.

COSD V8 Lung Measurement Non Primary Pathway Metastasis

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with lung as (
    select distinct
        Record ->> '$.Lung.LungCore.LungCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
        Record ->> '$.Lung.LungCore.LungCoreLinkageDiagnosticDetails.DateOfNonPrimaryCancerDiagnosisClinicallyAgreed' as DateOfNonPrimaryCancerDiagnosisClinicallyAgreed,
        unnest(
            [
                [ Record ->> '$.Lung.LungCore.LungCoreNonPrimaryCancerPathwayRoute.MetastaticSite.@code' ],
                Record ->> '$.Lung.LungCore.LungCoreNonPrimaryCancerPathwayRoute.MetastaticSite[*].@code'
            ],
            recursive := true
        ) as MetastaticSite
    from omop_staging.cosd_staging_81
    where type = 'LU'
)
select distinct
    NhsNumber,
    DateOfNonPrimaryCancerDiagnosisClinicallyAgreed,
    MetastaticSite
from lung
where MetastaticSite is not null
  and MetastaticSite != '97'
  and NhsNumber is not null;

Comment or raise an issue for this mapping.

COSD V8 Lung Measurement N Category Integrated Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with lung as (
	select 
		Record ->> '$.Lung.LungCore.LungCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
		Record ->> '$.Lung.LungCore.LungCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
		Record ->> '$.Lung.LungCore.LungCoreStaging.IntegratedStageNCategory' as NCategoryIntegratedStage,
		Record ->> '$.Lung.LungCore.LungCoreStaging.IntegratedStageTNMStageGroupingDate' as StageDateIntegratedStage
	from omop_staging.cosd_staging_81
	where Type = 'LU'
)
select distinct
	NhsNumber,
	coalesce(StageDateIntegratedStage, ClinicalDateCancerDiagnosis) as MeasurementDate,
	NCategoryIntegratedStage
from lung
where NCategoryIntegratedStage is not null
and NhsNumber is not null;

Comment or raise an issue for this mapping.

COSD V8 Lung Measurement N Category (Final Pretreatment)

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with lung as (
	select 
		Record ->> '$.Lung.LungCore.LungCoreLinkagePatientId.NHSNumber.@extension' as NHSNumber,
		Record ->> '$.Lung.LungCore.LungCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
		Record ->> '$.Lung.LungCore.LungCoreStaging.FinalPreTreatmentNCategory' as NcategoryFinalPreTreatment,
		Record ->> '$.Lung.LungCore.LungCoreStaging.FinalPreTreatmentTNMStageGroupingDate' as StageDateFinalPretreatmentStage
	from omop_staging.cosd_staging_81
	where Type = 'LU'
)
select distinct
	NHSNumber,
	coalesce(StageDateFinalPretreatmentStage, ClinicalDateCancerDiagnosis) as MeasurementDate,
	NcategoryFinalPreTreatment
from lung
where NcategoryFinalPreTreatment is not null
and NHSNumber is not null;

Comment or raise an issue for this mapping.

COSD V8 Lung Measurement M Category (Integrated Stage)

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with lung as (
	select 
		Record ->> '$.Lung.LungCore.LungCoreLinkagePatientId.NHSNumber.@extension' as NHSNumber,
		Record ->> '$.Lung.LungCore.LungCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
		Record ->> '$.Lung.LungCore.LungCoreStaging.IntegratedStageMCategory' as MCategoryIntegratedStage,
		Record ->> '$.Lung.LungCore.LungCoreStaging.IntegratedStageTNMStageGroupingDate' as StageDateIntegratedStage
	from omop_staging.cosd_staging_81
	where Type = 'LU'
)
select distinct
	NHSNumber,
	coalesce(StageDateIntegratedStage, ClinicalDateCancerDiagnosis) as MeasurementDate,
	MCategoryIntegratedStage
from lung
where MCategoryIntegratedStage is not null
and NHSNumber is not null;

Comment or raise an issue for this mapping.

COSD V8 Lung Measurement M Category (Final Pretreatment)

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with lung as (
	select 
		Record ->> '$.Lung.LungCore.LungCoreLinkagePatientId.NHSNumber.@extension' as NHSNumber,
		Record ->> '$.Lung.LungCore.LungCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
		Record ->> '$.Lung.LungCore.LungCoreStaging.FinalPreTreatmentMCategory' as McategoryFinalPreTreatment,
		Record ->> '$.Lung.LungCore.LungCoreStaging.FinalPreTreatmentTNMStageGroupingDate' as StageDateFinalPretreatmentStage
	from omop_staging.cosd_staging_81
	where Type = 'LU'
)
select distinct
	NHSNumber,
	coalesce(StageDateFinalPretreatmentStage, ClinicalDateCancerDiagnosis) as MeasurementDate,
	McategoryFinalPreTreatment
from lung
where McategoryFinalPreTreatment is not null
and NHSNumber is not null;

Comment or raise an issue for this mapping.

COSD V8 Lung Measurement Grade of Differentiation (At Diagnosis)

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with lung as (
	select 
		Record ->> '$.Lung.LungCore.LungCoreLinkagePatientId.NHSNumber.@extension' as NHSNumber,
		Record ->> '$.Lung.LungCore.LungCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
		Record ->> '$.Lung.LungCore.LungCoreLinkageDiagnosticDetails.DateOfNonPrimaryCancerDiagnosisClinicallyAgreed' as DateOfNonPrimaryCancerDiagnosisClinicallyAgreed,
		Record ->> '$.Lung.LungCore.LungCoreDiagnosis.DiagnosisGradeOfDifferentiation.@code' as GradeOfDifferentiationAtDiagnosis
	from omop_staging.cosd_staging_81
	where Type = 'LU'
)
select distinct
	NHSNumber,
	coalesce(ClinicalDateCancerDiagnosis, DateOfNonPrimaryCancerDiagnosisClinicallyAgreed) as MeasurementDate,
	GradeOfDifferentiationAtDiagnosis
from lung
where GradeOfDifferentiationAtDiagnosis is not null
and NHSNumber is not null;

Comment or raise an issue for this mapping.

COSD V9 Measurement Tumour Laterality

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

select 
	distinct
	    Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
	    Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed' as DateOfPrimaryDiagnosisClinicallyAgreed,
	    Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.TumourLaterality.@code' as TumourLaterality
from omop_staging.cosd_staging_901
where type = 'CO'
  and (Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.TumourLaterality.@code') in ('L','R','M','B');

Comment or raise an issue for this mapping.

COSD V9 Measurement TNM Category Integrated Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

select distinct
    Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
    coalesce(
        Record ->> '$.PrimaryPathway.Staging.StageDateIntegratedStage',
        Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed'
    ) as MeasurementDate,
    Record ->> '$.PrimaryPathway.Staging.TnmStageGroupingIntegrated' as TnmStageGroupingIntegrated
from omop_staging.cosd_staging_901
where type = 'CO'
  and TnmStageGroupingIntegrated is not null;

Comment or raise an issue for this mapping.

COSD V9 Measurement TNM Category Final Pre Treatment Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

select 
  distinct
    Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
    coalesce(
        Record ->> '$.PrimaryPathway.Staging.StageDateFinalPretreatmentStage',
        Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed'
    ) as MeasurementDate,
    Record ->> '$.PrimaryPathway.Staging.TnmStageGroupingFinalPretreatment' as TnmStageGroupingFinalPretreatment
from omop_staging.cosd_staging_901
where type = 'CO'
  and TnmStageGroupingFinalPretreatment is not null;

Comment or raise an issue for this mapping.

COSD V9 Measurement T Category Integrated Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

select 
  distinct
    Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
    coalesce(
        Record ->> '$.PrimaryPathway.Staging.StageDateIntegratedStage',
        Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed'
    ) as MeasurementDate,
    Record ->> '$.PrimaryPathway.Staging.TCategoryIntegratedStage' as TCategoryIntegratedStage
from omop_staging.cosd_staging_901
where type = 'CO'
  and TCategoryIntegratedStage is not null;

Comment or raise an issue for this mapping.

COSD V9 Measurement T Category Final Pre Treatment Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

select 
  distinct
    Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
    coalesce(
        Record ->> '$.PrimaryPathway.Staging.StageDateFinalPretreatmentStage',
        Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed'
    ) as MeasurementDate,
    Record ->> '$.PrimaryPathway.Staging.TCategoryFinalPretreatment' as TcategoryFinalPreTreatment
from omop_staging.cosd_staging_901
where type = 'CO'
  and TcategoryFinalPreTreatment is not null;

Comment or raise an issue for this mapping.

COSD V9 Measurement Synchronous Tumour Indicator

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

select 
	distinct
	    Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
	    Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed' as DateOfPrimaryDiagnosisClinicallyAgreed,
	    Record ->> '$.PrimaryPathway.Diagnosis.DiagnosisColorectal.SynchronousTumourIndicator.@code' as SynchronousTumourIndicator
from omop_staging.cosd_staging_901
where type = 'CO'
  and SynchronousTumourIndicator is not null;

Comment or raise an issue for this mapping.

COSD V9 Measurement Primary Pathway Metastasis

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with CO as (
    select distinct
        Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
        Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed' as DateOfPrimaryDiagnosisClinicallyAgreed,
        unnest(
            [
                [ Record ->> '$.PrimaryPathway.Diagnosis.MetastaticTypeAndSiteDiagnosis.MetastaticSite.@code' ],
                Record ->> '$.PrimaryPathway.Diagnosis.MetastaticTypeAndSiteDiagnosis[*].MetastaticSite.@code'
            ],
            recursive := true
        ) as MetastaticSite
    from omop_staging.cosd_staging_901
    where type = 'CO'
)
select distinct
    NhsNumber,
    DateOfPrimaryDiagnosisClinicallyAgreed,
    MetastaticSite
from CO
where MetastaticSite is not null
  and MetastaticSite != '97';

Comment or raise an issue for this mapping.

COSD V9 Measurement Non Primary Pathway Recurrence Metastasis

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with CO as (
    select distinct
        Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
        Record ->> '$.NonPrimaryPathway.DateOfNonPrimaryCancerDiagnosisClinicallyAgreed' as DateOfNonPrimaryCancerDiagnosisClinicallyAgreed,
        unnest(
            [
                [ Record ->> '$.NonPrimaryPathway.Recurrence.MetastaticTypeAndSiteRecurrence.MetastaticSite.@code' ],
                Record ->> '$.NonPrimaryPathway.Recurrence.MetastaticTypeAndSiteRecurrence[*].MetastaticSite.@code'
            ],
            recursive := true
        ) as MetastaticSite
    from omop_staging.cosd_staging_901
    where type = 'CO'
)
select distinct
    NhsNumber,
    DateOfNonPrimaryCancerDiagnosisClinicallyAgreed,
    MetastaticSite
from CO
where MetastaticSite is not null
  and MetastaticSite != '97';

Comment or raise an issue for this mapping.

COSD V9 Measurement Non Primary Pathway Progression Metastasis

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with CO as (
    select distinct
        Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
        Record ->> '$.NonPrimaryPathway.DateOfNonPrimaryCancerDiagnosisClinicallyAgreed' as DateOfNonPrimaryCancerDiagnosisClinicallyAgreed,
        unnest(
            [
                [ Record ->> '$.NonPrimaryPathway.Progression.MetastaticTypeAndSiteProgression.MetastaticSite.@code' ],
                Record ->> '$.NonPrimaryPathway.Progression.MetastaticTypeAndSiteProgression[*].MetastaticSite.@code'
            ],
            recursive := true
        ) as MetastaticSite
    from omop_staging.cosd_staging_901
    where type = 'CO'
)
select
    distinct
    NhsNumber,
    DateOfNonPrimaryCancerDiagnosisClinicallyAgreed,
    MetastaticSite
from CO
where MetastaticSite is not null
  and MetastaticSite != '97';

Comment or raise an issue for this mapping.

COSD V9 Measurement N Category Integrated Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

select 
  distinct
    Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
    coalesce(
        Record ->> '$.PrimaryPathway.Staging.StageDateIntegratedStage',
        Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed'
    ) as MeasurementDate,
    Record ->> '$.PrimaryPathway.Staging.NCategoryIntegratedStage' as NCategoryIntegratedStage
from omop_staging.cosd_staging_901
where type = 'CO'
  and NCategoryIntegratedStage is not null;

Comment or raise an issue for this mapping.

COSD V9 Measurement N Category Final Pre Treatment Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

select distinct
    Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
    coalesce(
        Record ->> '$.PrimaryPathway.Staging.StageDateFinalPretreatmentStage',
        Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed'
    ) as MeasurementDate,
    Record ->> '$.PrimaryPathway.Staging.NCategoryFinalPretreatment' as NcategoryFinalPreTreatment
from omop_staging.cosd_staging_901
where type = 'CO'
  and NcategoryFinalPreTreatment is not null;

Comment or raise an issue for this mapping.

COSD V9 Measurement M Category Integrated Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

select 
  distinct
    Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
    coalesce(
        Record ->> '$.PrimaryPathway.Staging.StageDateIntegratedStage',
        Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed'
    ) as MeasurementDate,
    Record ->> '$.PrimaryPathway.Staging.MCategoryIntegratedStage' as MCategoryIntegratedStage
from omop_staging.cosd_staging_901
where Type = 'CO'
  and MCategoryIntegratedStage is not null;

Comment or raise an issue for this mapping.

COSD V9 Measurement M Category Final Pre Treatment Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

select 
  distinct
    record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
    coalesce(
        record ->> '$.PrimaryPathway.Staging.StageDateFinalPretreatmentStage',
        record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed'
    ) as MeasurementDate,
    record ->> '$.PrimaryPathway.Staging.MCategoryFinalPretreatment' as McategoryFinalPreTreatment
from omop_staging.cosd_staging_901
where type = 'CO'
  and McategoryFinalPreTreatment is not null

Comment or raise an issue for this mapping.

COSD V9 Measurement Grade of Differentiation (At Diagnosis)

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

select
    distinct
        Record ->> '$.LinkagePatientId.NhsNumber.@extension' as NhsNumber,
        Record ->> '$.PrimaryPathway.LinkageDiagnosticDetails.DateOfPrimaryDiagnosisClinicallyAgreed' as DateOfPrimaryDiagnosisClinicallyAgreed,
        Record ->> '$.PrimaryPathway.Diagnosis.GradeOfDifferentiationAtDiagnosis.@code' as GradeOfDifferentiationAtDiagnosis,
from omop_staging.cosd_staging_901
where Type = 'CO'
  and GradeOfDifferentiationAtDiagnosis is not null

Comment or raise an issue for this mapping.

COSD V8 Measurement Tumour Laterality

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with co as (
    select
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.DateOfNonPrimaryCancerDiagnosisClinicallyAgreed' as DateOfNonPrimaryCancerDiagnosisClinicallyAgreed,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.TumourLaterality.@code' as TumourLaterality
    from omop_staging.cosd_staging_81
    where Type = 'CO'
)
select distinct
    NhsNumber,
    coalesce(ClinicalDateCancerDiagnosis, DateOfNonPrimaryCancerDiagnosisClinicallyAgreed) as MeasurementDate,
    TumourLaterality
from co
where TumourLaterality is not null
  and TumourLaterality in ('L','R','M','B');

Comment or raise an issue for this mapping.

COSD V8 Measurement Tumour Height Above Anal Verge

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with co as (
    select
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreDiagnosis.ColorectalDiagnosis.TumourHeightAboveAnalVerge.@value' as TumourHeightAboveAnalVerge
    from omop_staging.cosd_staging_81
    where Type = 'CO'
)
select distinct
    NhsNumber,
    ClinicalDateCancerDiagnosis,
    TumourHeightAboveAnalVerge
from co
where TumourHeightAboveAnalVerge is not null;

Comment or raise an issue for this mapping.

COSD V8 Measurement TNM Category Integrated Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with co as (
    select
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreStaging.IntegratedStageTNMStageGrouping' as TnmStageGroupingIntegrated,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreStaging.IntegratedStageTNMStageGroupingDate' as StageDateIntegratedStage
    from omop_staging.cosd_staging_81
    where Type = 'CO'
)
select distinct
    NhsNumber,
    coalesce(StageDateIntegratedStage, ClinicalDateCancerDiagnosis) as MeasurementDate,
    TnmStageGroupingIntegrated
from co
where TnmStageGroupingIntegrated is not null;

Comment or raise an issue for this mapping.

COSD V8 Measurement TNM Category Final Pre Treatment Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with co as (
    select
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreStaging.FinalPreTreatmentTNMStageGrouping' as TnmStageGroupingFinalPretreatment,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreStaging.FinalPreTreatmentTNMStageGroupingDate' as StageDateFinalPretreatmentStage
    from omop_staging.cosd_staging_81
    where Type = 'CO'
)
select distinct
    NhsNumber,
    coalesce(StageDateFinalPretreatmentStage, ClinicalDateCancerDiagnosis) as MeasurementDate,
    TnmStageGroupingFinalPretreatment
from co
where TnmStageGroupingFinalPretreatment is not null;

Comment or raise an issue for this mapping.

COSD V8 Measurement T Category Integrated Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with co as (
    select
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreStaging.IntegratedStageTCategory' as TCategoryIntegratedStage,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreStaging.IntegratedStageTNMStageGroupingDate' as StageDateIntegratedStage
    from omop_staging.cosd_staging_81
    where Type = 'CO'
)
select distinct
    NhsNumber,
    coalesce(StageDateIntegratedStage, ClinicalDateCancerDiagnosis) as MeasurementDate,
    TCategoryIntegratedStage
from co
where TCategoryIntegratedStage is not null;

Comment or raise an issue for this mapping.

COSD V8 Measurement T Category Final Pre Treatment Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with co as (
    select
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreStaging.FinalPreTreatmentTCategory' as TcategoryFinalPreTreatment,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreStaging.FinalPreTreatmentTNMStageGroupingDate' as StageDateFinalPretreatmentStage
    from omop_staging.cosd_staging_81
    where Type = 'CO'
)
select distinct
    NhsNumber,
    coalesce(StageDateFinalPretreatmentStage, ClinicalDateCancerDiagnosis) as MeasurementDate,
    TcategoryFinalPreTreatment
from co
where TcategoryFinalPreTreatment is not null;

Comment or raise an issue for this mapping.

COSD V8 Measurement Synchronous Tumour Indicator

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with co as (
    select
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreDiagnosis.ColorectalDiagnosis.SynchronousTumourColonLocation.@code' as SynchronousTumourIndicator
    from omop_staging.cosd_staging_81
    where Type = 'CO'
)
select distinct
    NhsNumber,
    ClinicalDateCancerDiagnosis,
    SynchronousTumourIndicator
from co
where SynchronousTumourIndicator is not null;

Comment or raise an issue for this mapping.

COSD V8 Measurement Primary Pathway Metastasis

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with co as (
select 
    Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
    Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
    unnest(
      [
        [
          Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreDiagnosis.MetastaticSite.@code'
        ], 
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreDiagnosis.MetastaticSite[*].@code'
      ], recursive := true
    ) as MetastaticSite
from omop_staging.cosd_staging_81
where Type = 'CO'
)
select distinct
    NhsNumber,
    ClinicalDateCancerDiagnosis,
    MetastaticSite
from co
where MetastaticSite is not null
  and MetastaticSite != 97;

Comment or raise an issue for this mapping.

COSD V8 Measurement Non Primary Pathway Metastasis

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with co as (
    select distinct
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
        Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.DateOfNonPrimaryCancerDiagnosisClinicallyAgreed' as DateOfNonPrimaryCancerDiagnosisClinicallyAgreed,
        unnest(
            [
                [ Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreNonPrimaryCancerPathwayRoute.MetastaticSite.@code' ],
                Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreNonPrimaryCancerPathwayRoute.MetastaticSite[*].@code'
            ],
            recursive := true
        ) as MetastaticSite
    from omop_staging.cosd_staging_81
    where type = 'CO'
)
select distinct
    NhsNumber,
    DateOfNonPrimaryCancerDiagnosisClinicallyAgreed,
    MetastaticSite
from co
where MetastaticSite is not null
  and MetastaticSite != '97';

Comment or raise an issue for this mapping.

COSD V8 Measurement N Category Integrated Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with CO as (
	select 
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreStaging.IntegratedStageNCategory' as NCategoryIntegratedStage,
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreStaging.IntegratedStageTNMStageGroupingDate' as StageDateIntegratedStage
	from omop_staging.cosd_staging_81
	where Type = 'CO'
)
select distinct
	NhsNumber,
	coalesce(StageDateIntegratedStage, ClinicalDateCancerDiagnosis) as MeasurementDate,
	NCategoryIntegratedStage
from CO
where NCategoryIntegratedStage is not null;

Comment or raise an issue for this mapping.

COSD V8 Measurement N Category Final Pre Treatment Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with CO as (
	select 
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreStaging.FinalPreTreatmentNCategory' as NcategoryFinalPreTreatment,
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreStaging.FinalPreTreatmentTNMStageGroupingDate' as StageDateFinalPretreatmentStage
	from omop_staging.cosd_staging_81
	where Type = 'CO'
)
select distinct
	NhsNumber,
	coalesce(StageDateFinalPretreatmentStage, ClinicalDateCancerDiagnosis) as MeasurementDate,
	NcategoryFinalPreTreatment
from CO
where NcategoryFinalPreTreatment is not null;

Comment or raise an issue for this mapping.

COSD V8 Measurement M Category Integrated Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with CO as (
	select 
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreStaging.IntegratedStageMCategory' as MCategoryIntegratedStage,
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreStaging.IntegratedStageTNMStageGroupingDate' as StageDateIntegratedStage
	from omop_staging.cosd_staging_81
	where Type = 'CO'
)
select distinct
	NhsNumber,
	coalesce(StageDateIntegratedStage, ClinicalDateCancerDiagnosis) as MeasurementDate,
	MCategoryIntegratedStage
from CO
where MCategoryIntegratedStage is not null;

Comment or raise an issue for this mapping.

COSD V8 Measurement M Category Final Pre Treatment Stage

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with CO as (
	select 
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreStaging.FinalPreTreatmentMCategory' as McategoryFinalPreTreatment,
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreStaging.FinalPreTreatmentTNMStageGroupingDate' as StageDateFinalPretreatmentStage
	from omop_staging.cosd_staging_81
	where Type = 'CO'
)
select distinct
	NhsNumber,
	coalesce(StageDateFinalPretreatmentStage, ClinicalDateCancerDiagnosis) as MeasurementDate,
	McategoryFinalPreTreatment
from CO
where McategoryFinalPreTreatment is not null;

Comment or raise an issue for this mapping.

COSD V8 Measurement Grade of Differentiation (At Diagnosis)

  • Value copied from NhsNumber

  • NhsNumber Patient NHS Number NHS NUMBER

with CO as (
	select 
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkagePatientId.NHSNumber.@extension' as NhsNumber,
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.ClinicalDateCancerDiagnosis' as ClinicalDateCancerDiagnosis,
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreLinkageDiagnosticDetails.DateOfNonPrimaryCancerDiagnosisClinicallyAgreed' as DateOfNonPrimaryCancerDiagnosisClinicallyAgreed,
		Record ->> '$.Colorectal.ColorectalCore.ColorectalCoreDiagnosis.DiagnosisGradeOfDifferentiation.@code' as GradeOfDifferentiationAtDiagnosis
	from omop_staging.cosd_staging_81
	where Type = 'CO'
)
select distinct
	NhsNumber,
	coalesce(ClinicalDateCancerDiagnosis, DateOfNonPrimaryCancerDiagnosisClinicallyAgreed) as MeasurementDate,
	GradeOfDifferentiationAtDiagnosis
from CO
where GradeOfDifferentiationAtDiagnosis is not null;

Comment or raise an issue for this mapping.