procedure_source_value

SUS Outpatient Procedure Occurrence

• Value copied from PrimaryProcedure

• PrimaryProcedure OPC4 Procedure code. PROCEDURE (OPCS)

	select
		distinct
		op.GeneratedRecordIdentifier,
		op.NHSNumber,
		op.AppointmentDate,
		op.AppointmentTime,
		p.ProcedureOPCS as PrimaryProcedure
	from omop_staging.sus_OP op
		inner join omop_staging.sus_OP_OPCSProcedure p
		on op.MessageId = p.MessageId
	where NHSNumber is not null
		and AttendedorDidNotAttend in ('5','6')
	

Comment or raise an issue for this mapping.

SUS CCMDS Procedure Occurrence

• Value copied from ProcedureSourceValue

• ProcedureSourceValue Used to look up the Procedure code. CRITICAL CARE ACTIVITY CODE

		select distinct
				apc.NHSNumber,
				apc.GeneratedRecordIdentifier,
				cc.CriticalCareStartDate as ProcedureOccurrenceStartDate,
				coalesce(cc.CriticalCareStartTime, '00:00:00') as ProcedureOccurrenceStartTime,
				coalesce(cc.CriticalCarePeriodDischargeDate, cc.EventDate) as ProcedureOccurrenceEndDate,
				coalesce(cc.CriticalCarePeriodDischargeTime, '00:00:00') as ProcedureOccurrenceEndTime,
				d.CriticalCareActivityCode as ProcedureSourceValue
		from omop_staging.sus_CCMDS_CriticalCareActivityCode d
		inner join omop_staging.sus_CCMDS cc on d.MessageId = cc.MessageId
		inner join omop_staging.sus_APC apc on cc.GeneratedRecordID = apc.GeneratedRecordIdentifier
		where apc.NHSNumber is not null
		and d.CriticalCareActivityCode != '99'  -- No Defined Critical Care Activity

	

Comment or raise an issue for this mapping.

SUS APC Procedure Occurrence

• Value copied from PrimaryProcedure

• PrimaryProcedure OPC4 Procedure code. PROCEDURE (OPCS)

select
	distinct
		apc.GeneratedRecordIdentifier,
		apc.NHSNumber,
		p.ProcedureDateOPCS as PrimaryProcedureDate,
		p.ProcedureOPCS as PrimaryProcedure
from omop_staging.sus_APC apc
	inner join omop_staging.sus_OPCSProcedure p
		on apc.MessageId = p.MessageId
where NHSNumber is not null
	

Comment or raise an issue for this mapping.

SUS AE Procedure Occurrence

• Value copied from PrimaryProcedure

• PrimaryProcedure ACCIDENT AND EMERGENCY TREATMENT is a six character code, comprising: Condition n2 (see Treatment Table below) Sub-Analysis n1 (see Sub-analysis Table below) Local use up to an3 ACCIDENT and EMERGENCY CLINICAL CODES

	select
		distinct
			ae.GeneratedRecordIdentifier,
			ae.NHSNumber,
			ae.CDSActivityDate as PrimaryProcedureDate,
			p.AccidentAndEmergencyTreatment as PrimaryProcedure
	from omop_staging.sus_AE ae
		inner join omop_staging.sus_AE_treatment p
			on AE.MessageId = p.MessageId
	where NHSNumber is not null
	

Comment or raise an issue for this mapping.

Cosd V9 Procedure Occurrence Procedure Opcs

• Value copied from ProcedureOpcsCode

• ProcedureOpcsCode PROCEDURE (OPCS) is a Patient Procedure other than the PRIMARY PROCEDURE (OPCS). PROCEDURE (OPCS)

;with XMLNAMESPACES('http://www.datadictionary.nhs.uk/messages/COSD-v9-0-1' AS COSD901),								
CosdRecords as (				
	select								
		T.staging.value('(Id/@root)[1]', 'uniqueidentifier') as Id,								
		T.staging.query('.') as Node								
		from omop_staging.cosd_staging								
	cross apply content.nodes('COSD901:COSD/*') as T(staging)								
	where T.staging.exist('Id/@root') = 1								
		and Content.value('namespace-uri((/*:COSD)[1])','nvarchar(max)') = 'http://www.datadictionary.nhs.uk/messages/COSD-v9-0-1'								
		and substring (FileName, 15, 2) = 'CO'								
), ProcedureOpcs as (				
	select								
		Id,								
		T.p.value('.', 'varchar(max)') as ProcedureOpcsCode															
	from CosdRecords								
	cross apply Node.nodes('ColorectalRecord/Treatment/Surgery/ProcedureOpcs/@code') as T(p)
), COSD as (
	select
		Id,
		Node.value('(ColorectalRecord/LinkagePatientId/NhsNumber/@extension)[1]', 'varchar(max)') as NhsNumber,
		Node.value('(ColorectalRecord/Treatment/Surgery/ProcedureDate)[1]', 'varchar(max)') as ProcedureDate
	from CosdRecords
)
select
	distinct
		c.NhsNumber,
		c.ProcedureDate,
		p.ProcedureOpcsCode
from COSD c
	inner join ProcedureOpcs p
		on c.Id = p.Id;
	

Comment or raise an issue for this mapping.

Cosd V9 Procedure Occurrence Primary Procedure Opcs

• Value copied from PrimaryProcedureOpcs

• PrimaryProcedureOpcs PRIMARY PROCEDURE (OPCS) is the OPCS Classification of Interventions and Procedures code which is used to identify the primary Patient Procedure carried out. PRIMARY PROCEDURE (OPCS)

;with XMLNAMESPACES('http://www.datadictionary.nhs.uk/messages/COSD-v9-0-1' AS COSD901),								
CosdRecords as (				
	select								
		T.staging.value('(Id/@root)[1]', 'uniqueidentifier') as Id,								
		T.staging.query('.') as Node								
		from omop_staging.cosd_staging								
	cross apply content.nodes('COSD901:COSD/*') as T(staging)								
	where T.staging.exist('Id/@root') = 1								
		and Content.value('namespace-uri((/*:COSD)[1])','nvarchar(max)') = 'http://www.datadictionary.nhs.uk/messages/COSD-v9-0-1'								
		and substring (FileName, 15, 2) = 'CO'								
), COSD as (
	select
		Id,
		Node.value('(ColorectalRecord/LinkagePatientId/NhsNumber/@extension)[1]', 'varchar(max)') as NhsNumber,
		Node.value('(ColorectalRecord/Treatment/Surgery/ProcedureDate)[1]', 'varchar(max)') as ProcedureDate,
		Node.value('(ColorectalRecord/Treatment/Surgery/PrimaryProcedureOpcs/@code)[1]', 'varchar(max)') as PrimaryProcedureOpcs
	from CosdRecords
)
select
	distinct
		NhsNumber,
		ProcedureDate,
		PrimaryProcedureOpcs
from COSD c
where ProcedureDate is not null and PrimaryProcedureOpcs is not null;
	

Comment or raise an issue for this mapping.

Cosd V8 Procedure Occurrence Procedure Opcs

• Value copied from ProcedureOpcsCode

• ProcedureOpcsCode PROCEDURE (OPCS) is a Patient Procedure other than the PRIMARY PROCEDURE (OPCS). PROCEDURE (OPCS)

;with XMLNAMESPACES('http://www.datadictionary.nhs.uk/messages/COSD-v8-1' AS COSD),
    CosdRecords as ( 
    select
        T.staging.value('(Id/@root)[1]', 'uniqueidentifier') as Id,
        T.staging.query('*[local-name() != "Id"][1]/*[1]') as Node -- Select the first inner element of the element that is not called Id.
    from omop_staging.cosd_staging
    cross apply content.nodes('COSD:COSD/*') as T(staging)
    where T.staging.exist('Id/@root') = 1
            and Content.value('namespace-uri((/*:COSD)[1])','nvarchar(max)') = 'http://www.datadictionary.nhs.uk/messages/COSD-v8-1'
            and substring (FileName, 15, 2) = 'CO'
), CO as (
	select 
        Id,
        Node,
        Node.value('(ColorectalCore/ColorectalCoreLinkagePatientId/NHSNumber/@extension)[1]', 'varchar(max)') as NhsNumber,
		Node.value('(ColorectalCore/ColorectalCoreTreatment/ColorectalCoreSurgeryAndOtherProcedures/ProcedureDate)[1]', 'varchar(max)') as ProcedureDate,
		Node.value('(ColorectalCore/ColorectalCoreTreatment/ColorectalCoreSurgeryAndOtherProcedures/PrimaryProcedureOPCS/@code)[1]', 'varchar(max)') as PrimaryProcedureOpcs
	from CosdRecords        
), ProcedureOpcs as (				
	select								
		Id,								
		T.p.value('.', 'varchar(max)') as ProcedureOpcsCode															
	from CosdRecords								
	cross apply Node.nodes('ColorectalCore/ColorectalCoreTreatment/ColorectalCoreSurgeryAndOtherProcedures/ProcedureOPCS/@code') as T(p)
)
select
	distinct
		c.NhsNumber,
		c.ProcedureDate,
		p.ProcedureOpcsCode
from CO c
	inner join ProcedureOpcs p
		on c.Id = p.Id;
	

Comment or raise an issue for this mapping.

Cosd V8 Procedure Occurrence Primary Procedure Opcs

• Value copied from PrimaryProcedureOpcs

• PrimaryProcedureOpcs PRIMARY PROCEDURE (OPCS) is the OPCS Classification of Interventions and Procedures code which is used to identify the primary Patient Procedure carried out. PRIMARY PROCEDURE (OPCS)

;with XMLNAMESPACES('http://www.datadictionary.nhs.uk/messages/COSD-v8-1' AS COSD),
    CosdRecords as ( 
    select
            T.staging.value('(Id/@root)[1]', 'uniqueidentifier') as Id,
            T.staging.query('*[local-name() != "Id"][1]/*[1]') as Node -- Select the first inner element of the element that is not called Id.
    from omop_staging.cosd_staging
    cross apply content.nodes('COSD:COSD/*') as T(staging)
    where T.staging.exist('Id/@root') = 1
            and Content.value('namespace-uri((/*:COSD)[1])','nvarchar(max)') = 'http://www.datadictionary.nhs.uk/messages/COSD-v8-1'
            and substring (FileName, 15, 2) = 'CO'
), CO as (
	select 
        Id,
        Node,
        Node.value('(ColorectalCore/ColorectalCoreLinkagePatientId/NHSNumber/@extension)[1]', 'varchar(max)') as NhsNumber,
		Node.value('(ColorectalCore/ColorectalCoreTreatment/ColorectalCoreSurgeryAndOtherProcedures/ProcedureDate)[1]', 'varchar(max)') as ProcedureDate,
		Node.value('(ColorectalCore/ColorectalCoreTreatment/ColorectalCoreSurgeryAndOtherProcedures/PrimaryProcedureOPCS/@code)[1]', 'varchar(max)') as PrimaryProcedureOpcs
	from CosdRecords        
)
select
	distinct
		NhsNumber,
		ProcedureDate,
		PrimaryProcedureOpcs
from CO c
where ProcedureDate is not null and PrimaryProcedureOpcs is not null;
	

Comment or raise an issue for this mapping.

CDS Procedure Occurrence

• Value copied from PrimaryProcedure

• PrimaryProcedure OPC4 Procedure code. PROCEDURE (OPCS)

select
	distinct
		l1.RecordConnectionIdentifier,
		l1.NHSNumber,
		p.PrimaryProcedureDate,
		p.PrimaryProcedure
from omop_staging.cds_line01 l1
	inner join omop_staging.cds_procedure p
		on l1.MessageId = p.MessageId
where l1.NHSNumber is not null;
	

Comment or raise an issue for this mapping.